Package: deepSTRAPP
Title: Test for Differences in Diversification Rates over Time
Version: 1.1.1
Authors@R: c(
    person("Maël", "Doré", , email = "mael.dore@gmail.com", role = c("aut", "cre", "cph"),
           comment = c(ORCID = "0000-0003-3242-9242")),
    person("Dan", "Rabosky", role = "ctb"),
    person("Mike", "Grundler", role = "ctb"),
    person("Huateng", "Huang", role = "ctb"),
    person("Pascal", "Title", role = "ctb"),
    person("Liam", "Revell", role = "ctb"),
    person("Nicholas J.", "Matzke", role = "ctb"))
Description: Employ time-calibrated phylogenies and trait/range data to
        test for differences in diversification rates over evolutionary
        time.  Extend the STRAPP test from
        BAMMtools::traitDependentBAMM() to any time step along
        phylogenies. See inst/COPYRIGHTS for details on third-party
        code.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
URL: https://github.com/MaelDore/deepSTRAPP,
        https://maeldore.github.io/deepSTRAPP/
BugReports: https://github.com/MaelDore/deepSTRAPP/issues
Imports: ape (>= 5.8.0), BAMMtools (>= 2.1.12), cladoRcpp (>= 0.15.1),
        coda (>= 0.19-4.1), cowplot (>= 1.1.3), dplyr (>= 1.1.4),
        dunn.test (>= 1.3.6), geiger (>= 2.0.11), ggplot2 (>= 3.5.0),
        methods (>= 4.4.2), phytools (>= 2.0.0), plyr (>= 1.8.9), purrr
        (>= 1.0.2), qpdf (>= 1.4.1), RColorBrewer (>= 1.1-3), Rcpp (>=
        1.0.14), rlang (>= 1.1.6), scales (>= 1.3.0), stringr (>=
        1.5.1), tidyr (>= 1.3.1)
Depends: R (>= 4.4)
LazyData: true
LazyDataCompression: xz
Suggests: knitr, maps (>= 3.4.2), parallel (>= 4.4.2), BioGeoBEARS (>=
        1.1.3), rmarkdown, contsimmap (>= 0.1.0)
Additional_repositories: https://maeldore.github.io/drat
LinkingTo: Rcpp
VignetteBuilder: knitr
Repository: https://maeldore.r-universe.dev
Date/Publication: 2026-10-29 10:36:26 UTC
RemoteUrl: https://github.com/maeldore/deepstrapp
RemoteRef: HEAD
RemoteSha: 048beb26ea67cb260149964c7a5c61b67acb5488
NeedsCompilation: yes
Packaged: 2026-10-29 17:14:52 UTC; root
Author: Maël Doré [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0003-3242-9242>),
  Dan Rabosky [ctb],
  Mike Grundler [ctb],
  Huateng Huang [ctb],
  Pascal Title [ctb],
  Liam Revell [ctb],
  Nicholas J. Matzke [ctb]
Maintainer: Maël Doré <mael.dore@gmail.com>